Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine-specific permease | DFS94_RS07375 | Not Available | - | 1406898 - 1408367 | 53536.9 |
| dna-binding transcriptional regulator yeie | DFS94_RS07380 | Not Available | - | 1408572 - 1409453 | 32725.7 |
| yeih family protein | DFS94_RS07385 | Not Available | + | 1409552 - 1410601 | 36914.4 |
| deoxyribonuclease iv | DFS94_RS07390 | Not Available | + | 1410675 - 1411532 | 31463.2 |
| sugar kinase | DFS94_RS07395 | Not Available | + | 1411536 - 1412624 | 40115.1 |
| ribosylpyrimidine nucleosidase | DFS94_RS07400 | Not Available | - | 1412892 - 1413833 | 33777.1 |
| transcriptional regulator yeil | DFS94_RS07405 | Not Available | + | 1413963 - 1414661 | 26867.6 |
| is1 family transposase | DFS94_RS07410 | Not Available | - | 1414717 - 1415414 | 26590.4 |
| nupc/nupg family nucleoside cnt transporter | DFS94_RS07415 | Not Available | - | 1415505 - 1416755 | 43470.4 |
| pseudouridine-5'-phosphate glycosidase | DFS94_RS07420 | Not Available | - | 1416849 - 1417787 | 32991.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism