Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein yehi | DFS94_RS07175 | Not Available | + | 1359725 - 1363357 | 137642.0 |
| hypothetical protein | DFS94_RS07180 | Not Available | + | 1363418 - 1363734 | 12119.7 |
| atp-binding protein | DFS94_RS07185 | Not Available | + | 1364436 - 1365524 | 39750.9 |
| duf5682 family protein | DFS94_RS07190 | Not Available | + | 1365535 - 1367814 | 83464.9 |
| vwa domain-containing protein | DFS94_RS07195 | Not Available | + | 1367807 - 1368943 | 42322.8 |
| swim zinc finger family protein | DFS94_RS07200 | Not Available | + | 1368940 - 1370943 | 73757.4 |
| yehr family lipoprotein | DFS94_RS07205 | Not Available | + | 1371068 - 1371529 | 16623.0 |
| duf1456 family protein | DFS94_RS07210 | Not Available | - | 1371570 - 1372040 | 18003.9 |
| two-component system response regulator btsr | DFS94_RS07215 | Not Available | - | 1372087 - 1372806 | 27401.4 |
| two-component regulatory system sensor histidine kinase btss | DFS94_RS07220 | Not Available | - | 1372803 - 1374488 | 62096.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism