Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | DFS94_RS07125 | Not Available | + | 1342626 - 1342964 | 12466.8 |
| putative fimbrial-like adhesin protein | DFS94_RS07130 | Not Available | - | 1343046 - 1344080 | 36959.1 |
| fimbrial biogenesis outer membrane usher protein | DFS94_RS07135 | Not Available | - | 1344096 - 1346576 | 92397.3 |
| fimbria/pilus periplasmic chaperone | DFS94_RS07140 | Not Available | - | 1346592 - 1347266 | 24803.3 |
| fimbrial protein | DFS94_RS07145 | Not Available | - | 1347347 - 1347889 | 19059.6 |
| yehe family protein | DFS94_RS07150 | Not Available | - | 1348182 - 1348463 | 10178.1 |
| iron-sulfur cluster carrier protein apbc | DFS94_RS07155 | Not Available | - | 1348726 - 1349835 | 39940.4 |
| methionine--trna ligase | DFS94_RS07160 | Not Available | + | 1349967 - 1352000 | 76258.9 |
| duf4132 domain-containing protein | DFS94_RS07165 | Not Available | + | 1352141 - 1355941 | 143458.0 |
| duf4132 domain-containing protein | DFS94_RS07170 | Not Available | + | 1355954 - 1359715 | 140423.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism