Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385

Accession NumberNZ_CP029420.1

Gene Summary

Adenine Count

1206723 bp

Thymine Count

1205119 bp

Guanine Count

1247224 bp

Cytosine Count

1251356 bp

Genome Length

4910422 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
vwa domain-containing proteinDFS94_RS06975Not Available-1309949 - 131060824182.9
type i toxin-antitoxin system ibs family toxinDFS94_RS06980Not Available-1310826 - 13108822079.86
type i toxin-antitoxin system ibs family toxinDFS94_RS06985Not Available-1311154 - 13112102136.9
multidrug efflux rnd transporter subunit mdtaDFS94_RS06990Not Available+1311489 - 131273644392.7
multidrug efflux rnd transporter permease subunit mdtbDFS94_RS06995Not Available+1312736 - 1315858112088.0
multidrug efflux rnd transporter permease subunit mdtcDFS94_RS07000Not Available+1315859 - 1318936110963.0
mfs transporterDFS94_RS07005Not Available+1318937 - 132035250896.1
two-component system sensor histidine kinase baesDFS94_RS07010Not Available+1320349 - 132175252115.5
two-component system response regulator baerDFS94_RS07015Not Available+1321749 - 132247127657.5
yegp family proteinDFS94_RS07020Not Available+1322651 - 132298311994.9

Displaying genes 1431 – 1440 of 4943 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites