Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps biosynthesis protein | DFS94_RS06780 | Not Available | - | 1262023 - 1262628 | 22224.4 |
| hypothetical protein | DFS94_RS06785 | Not Available | - | 1262854 - 1263915 | 39348.1 |
| glycosyltransferase family 4 protein | DFS94_RS06790 | Not Available | - | 1263887 - 1265035 | 44059.5 |
| glycosyltransferase family 2 protein | DFS94_RS06795 | Not Available | - | 1265098 - 1266063 | 37109.6 |
| o25 family o-antigen flippase | DFS94_RS06800 | Not Available | - | 1266068 - 1267327 | 46965.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DFS94_RS06805 | Not Available | - | 1267329 - 1267871 | 20645.6 |
| glucose-1-phosphate thymidylyltransferase rfba | DFS94_RS06810 | Not Available | - | 1267876 - 1268754 | 32483.2 |
| dtdp-4-dehydrorhamnose reductase | DFS94_RS06815 | Not Available | - | 1268812 - 1269711 | 32648.8 |
| dtdp-glucose 4,6-dehydratase | DFS94_RS06820 | Not Available | - | 1269711 - 1270796 | 40704.5 |
| utp--glucose-1-phosphate uridylyltransferase galf | DFS94_RS06825 | Not Available | - | 1271169 - 1272062 | 32799.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism