Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DFS94_RS06730 | Not Available | + | 1252163 - 1253230 | 40205.2 |
| imidazole glycerol phosphate synthase subunit hish | DFS94_RS06735 | Not Available | + | 1253230 - 1253820 | 21698.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DFS94_RS06740 | Not Available | + | 1253820 - 1254557 | 26106.3 |
| imidazole glycerol phosphate synthase subunit hisf | DFS94_RS06745 | Not Available | + | 1254539 - 1255315 | 28456.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DFS94_RS06750 | Not Available | + | 1255309 - 1255920 | 22751.1 |
| lps o-antigen chain length determinant protein wzzb | DFS94_RS06755 | Not Available | - | 1256106 - 1257083 | 36347.8 |
| udp-glucose 6-dehydrogenase | DFS94_RS06760 | Not Available | - | 1257229 - 1258395 | 43673.3 |
| nadp-dependent phosphogluconate dehydrogenase | DFS94_RS06765 | Not Available | - | 1258642 - 1260048 | 51527.2 |
| glycosyltransferase | DFS94_RS06770 | Not Available | - | 1260145 - 1260936 | 31089.8 |
| glycosyltransferase | DFS94_RS06775 | Not Available | - | 1260938 - 1262038 | 43310.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism