Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putrescine/proton symporter plap | DFS94_RS06675 | Not Available | - | 1244399 - 1245757 | 49554.6 |
| membrane protein yoei | DFS94_RS06680 | Not Available | - | 1245747 - 1245809 | 2241.66 |
| lysr substrate-binding domain-containing protein | DFS94_RS06685 | Not Available | - | 1246024 - 1246953 | 34186.0 |
| sdr family oxidoreductase | DFS94_RS06690 | Not Available | - | 1246999 - 1247823 | 29681.7 |
| type ii toxin-antitoxin system mrna interferase toxin yoeb | DFS94_RS06695 | Not Available | - | 1247906 - 1248160 | 10143.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | DFS94_RS06700 | Not Available | - | 1248157 - 1248408 | 9366.16 |
| his operon leader peptide | DFS94_RS06710 | Not Available | + | 1248691 - 1248741 | 2081.43 |
| atp phosphoribosyltransferase | DFS94_RS06715 | Not Available | + | 1248887 - 1249786 | 33368.8 |
| histidinol dehydrogenase | DFS94_RS06720 | Not Available | + | 1249792 - 1251096 | 46214.9 |
| histidinol-phosphate transaminase | DFS94_RS06725 | Not Available | + | 1251093 - 1252163 | 39376.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism