Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5983 family protein | DFS94_RS06615 | Not Available | + | 1237370 - 1237564 | 6959.16 |
| hypothetical protein | DFS94_RS06620 | Not Available | + | 1237610 - 1237690 | 3069.82 |
| transposase domain-containing protein | DFS94_RS26200 | Not Available | - | 1237979 - 1238152 | 6370.84 |
| eutp/pduv family microcompartment system protein | DFS94_RS26205 | Not Available | + | 1238179 - 1238361 | 6392.67 |
| duf496 family protein | DFS94_RS06635 | Not Available | - | 1238462 - 1238791 | 12778.5 |
| fusc family protein | DFS94_RS06640 | Not Available | - | 1238963 - 1240021 | 39972.7 |
| dna gyrase inhibitor sbmc | DFS94_RS06645 | Not Available | - | 1240219 - 1240692 | 18106.4 |
| serine-type d-ala-d-ala carboxypeptidase dacd | DFS94_RS06650 | Not Available | - | 1240811 - 1241977 | 43304.5 |
| exodeoxyribonuclease i | DFS94_RS06655 | Not Available | + | 1242186 - 1243613 | 54440.6 |
| is200/is605-like element is200c family transposase | DFS94_RS06670 | Not Available | - | 1243724 - 1244182 | 17974.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism