Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is66-like element isec23 family transposase | DFS94_RS06560 | Not Available | + | 1231195 - 1232808 | 61275.1 |
| hypothetical protein | DFS94_RS06565 | Not Available | + | 1232865 - 1233236 | 13723.5 |
| duf932 domain-containing protein | DFS94_RS06575 | Not Available | + | 1233457 - 1234275 | 31433.6 |
| hypothetical protein | DFS94_RS06580 | Not Available | + | 1234275 - 1234520 | 8886.48 |
| antirestriction protein | DFS94_RS06585 | Not Available | + | 1234614 - 1235087 | 17881.2 |
| radc family protein | DFS94_RS06590 | Not Available | + | 1235103 - 1235579 | 17765.5 |
| duf987 domain-containing protein | DFS94_RS06595 | Not Available | + | 1235642 - 1235863 | 8409.23 |
| hypothetical protein | DFS94_RS06600 | Not Available | + | 1235882 - 1236526 | 24956.0 |
| type iv toxin-antitoxin system yeeu family antitoxin | DFS94_RS06605 | Not Available | + | 1236542 - 1236910 | 13844.5 |
| type iv toxin-antitoxin system cytoskeleton-binding toxin cbta | DFS94_RS06610 | Not Available | + | 1236999 - 1237373 | 13830.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism