Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein drpb | DFS94_RS05775 | Not Available | - | 1087449 - 1087730 | 10514.9 |
| porin | DFS94_RS05785 | Not Available | + | 1088380 - 1089495 | 41100.3 |
| glyoxalase iii hcha | DFS94_RS05795 | Not Available | + | 1090088 - 1090939 | 31238.1 |
| two-component system sensor histidine kinase hprs | DFS94_RS05800 | Not Available | - | 1091047 - 1092405 | 50803.8 |
| response regulator transcription factor hprr | DFS94_RS05805 | Not Available | - | 1092405 - 1093076 | 24982.2 |
| hydroxyisourate hydrolase | DFS94_RS05810 | Not Available | + | 1093209 - 1093622 | 15509.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | DFS94_RS05815 | Not Available | + | 1093731 - 1094735 | 37418.9 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | DFS94_RS05820 | Not Available | + | 1094736 - 1095371 | 24040.6 |
| yersiniabactin biosynthesis salicylate synthase irp9/ybts | DFS94_RS06155 | Not Available | - | 1141189 - 1142493 | 47990.4 |
| yersiniabactin-associated zinc mfs transporter ybtx | DFS94_RS06160 | Not Available | - | 1142521 - 1143801 | 44830.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism