Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor flia | DFS94_RS05565 | Not Available | - | 1055287 - 1056006 | 27549.8 |
| flagellin flic | DFS94_RS05570 | Not Available | - | 1056170 - 1057219 | 36292.2 |
| flagellar filament capping protein flid | DFS94_RS05575 | Not Available | + | 1057467 - 1058882 | 48831.2 |
| flagellar export chaperone flis | DFS94_RS05580 | Not Available | + | 1058898 - 1059308 | 15020.1 |
| flagella biosynthesis regulatory protein flit | DFS94_RS05585 | Not Available | + | 1059308 - 1059673 | 13776.6 |
| alpha-amylase | DFS94_RS05590 | Not Available | + | 1059751 - 1061238 | 56589.2 |
| lipoprotein yedd | DFS94_RS05595 | Not Available | - | 1061272 - 1061685 | 15032.2 |
| selenium metabolism membrane protein yede/fdht | DFS94_RS05600 | Not Available | + | 1061872 - 1063077 | 44431.5 |
| sulfurtransferase-like selenium metabolism protein yedf | DFS94_RS05605 | Not Available | + | 1063074 - 1063307 | 8639.5 |
| hypothetical protein | DFS94_RS05610 | Not Available | + | 1063416 - 1063838 | 16279.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism