Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | DFS94_RS04965 | Not Available | - | 959114 - 960124 | 37166.0 |
| holliday junction branch migration protein ruva | DFS94_RS04970 | Not Available | - | 960133 - 960744 | 22087.0 |
| stress response small protein yobi | DFS94_RS04975 | Not Available | - | 960883 - 960948 | 2669.4 |
| yebb family permuted papain-like enzyme | DFS94_RS04980 | Not Available | + | 961019 - 961621 | 22646.2 |
| crossover junction endodeoxyribonuclease ruvc | DFS94_RS04985 | Not Available | - | 961623 - 962144 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DFS94_RS04990 | Not Available | - | 962179 - 962919 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | DFS94_RS04995 | Not Available | - | 962948 - 963400 | 17254.6 |
| aspartate--trna ligase | DFS94_RS05000 | Not Available | - | 963393 - 965165 | 65889.2 |
| hydrolase | DFS94_RS05005 | Not Available | + | 965475 - 966041 | 20504.4 |
| duf72 domain-containing protein | DFS94_RS05010 | Not Available | + | 966038 - 966856 | 31555.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism