Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone proq | DFS94_RS04815 | Not Available | - | 928101 - 928799 | 25853.9 |
| l-methionine (r)-s-oxide reductase | DFS94_RS04820 | Not Available | - | 928896 - 929393 | 18050.5 |
| membrane integrity lipid transport subunit yebs | DFS94_RS04825 | Not Available | + | 929523 - 930806 | 48217.3 |
| lipid-binding membrane homeostasis protein yebt | DFS94_RS04830 | Not Available | + | 930775 - 933408 | 94879.9 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | DFS94_RS04835 | Not Available | + | 933488 - 934927 | 53235.4 |
| yebv family protein | DFS94_RS04840 | Not Available | + | 935044 - 935280 | 8753.26 |
| yebw family protein | DFS94_RS04845 | Not Available | + | 935385 - 935576 | 7324.62 |
| protein-serine/threonine phosphatase | DFS94_RS04850 | Not Available | - | 935577 - 936233 | 25326.4 |
| yeby family protein | DFS94_RS04855 | Not Available | - | 936628 - 936969 | 12393.2 |
| copper homeostasis membrane protein copd | DFS94_RS04860 | Not Available | - | 936982 - 937854 | 32461.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism