Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanine(745)-n(1))-methyltransferase | DFS94_RS04765 | Not Available | - | 919516 - 920325 | 30547.8 |
| transcription antiterminator/rna stability regulator cspe | DFS94_RS04770 | Not Available | - | 920491 - 920700 | 7402.76 |
| duf2627 domain-containing protein | DFS94_RS04775 | Not Available | - | 920713 - 920856 | 5212.44 |
| yebo family protein | DFS94_RS04780 | Not Available | - | 921526 - 921813 | 10793.1 |
| phop/phoq regulator mgrb | DFS94_RS04785 | Not Available | - | 921888 - 922031 | 5524.03 |
| yobh family protein | DFS94_RS04790 | Not Available | + | 922190 - 922429 | 8514.67 |
| dna-binding transcriptional regulator kdgr | DFS94_RS04795 | Not Available | - | 922573 - 923364 | 30046.2 |
| mfs transporter | DFS94_RS04800 | Not Available | + | 923541 - 924914 | 48107.7 |
| protease htpx | DFS94_RS04805 | Not Available | - | 924960 - 925841 | 31959.3 |
| carboxy terminal-processing peptidase | DFS94_RS04810 | Not Available | - | 926033 - 928081 | 76683.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism