Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf488 domain-containing protein | DFS94_RS04620 | Not Available | + | 895735 - 896082 | 13355.9 |
| duf333 domain-containing lipoprotein yoaf | DFS94_RS04625 | Not Available | - | 896104 - 896358 | 8942.87 |
| diguanylate cyclase dgcp | DFS94_RS04630 | Not Available | + | 896541 - 897566 | 38541.8 |
| yoak family small membrane protein | DFS94_RS04635 | Not Available | + | 897599 - 897697 | 3458.45 |
| protein yoaj | DFS94_RS04640 | Not Available | + | 897700 - 897774 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | DFS94_RS04645 | Not Available | - | 897833 - 898081 | 8671.14 |
| duf1869 domain-containing protein | DFS94_RS04650 | Not Available | - | 898229 - 898411 | 6608.63 |
| duf1971 domain-containing protein year | DFS94_RS04655 | Not Available | - | 898415 - 898774 | 13612.2 |
| leucine efflux protein leue | DFS94_RS04660 | Not Available | - | 898947 - 899585 | 23262.0 |
| hypothetical protein | DFS94_RS25905 | Not Available | - | 899712 - 899879 | 6356.51 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism