Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| scaffolding protein mipa | DFS94_RS04570 | Not Available | - | 884552 - 885298 | 27832.4 |
| protein kinase yeag | DFS94_RS04575 | Not Available | + | 885734 - 887668 | 74484.3 |
| yeah/yhbh family protein | DFS94_RS04580 | Not Available | + | 887781 - 889064 | 49453.2 |
| ggdef domain-containing protein | DFS94_RS04585 | Not Available | + | 889211 - 890686 | 56039.6 |
| diguanylate cyclase dgcj | DFS94_RS04590 | Not Available | + | 890867 - 892357 | 56674.9 |
| mischarged aminoacyl-trna deacylase | DFS94_RS04595 | Not Available | + | 892400 - 892903 | 17850.7 |
| small membrane protein yoai | DFS94_RS04600 | Not Available | - | 892904 - 893008 | 3743.71 |
| duf441 domain-containing protein | DFS94_RS04605 | Not Available | + | 893178 - 893624 | 15256.6 |
| dna-binding transcriptional regulator nimr | DFS94_RS04610 | Not Available | - | 893581 - 894402 | 30600.4 |
| 2-nitroimidazole transporter | DFS94_RS04615 | Not Available | + | 894499 - 895680 | 41250.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism