Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | DFS94_RS04470 | Not Available | - | 863036 - 864991 | 73264.0 |
| selenide, water dikinase seld | DFS94_RS04475 | Not Available | - | 864996 - 866039 | 36703.5 |
| nad(p)h nitroreductase | DFS94_RS04480 | Not Available | - | 866156 - 866707 | 20059.2 |
| signal peptide peptidase sppa | DFS94_RS04485 | Not Available | + | 866868 - 868724 | 67263.0 |
| simpl domain-containing protein | DFS94_RS04490 | Not Available | + | 868840 - 869550 | 25241.9 |
| asparaginase | DFS94_RS04495 | Not Available | + | 869682 - 870698 | 37158.5 |
| bifunctional nicotinamidase/pyrazinamidase | DFS94_RS04500 | Not Available | + | 870709 - 871350 | 23335.4 |
| mfs transporter | DFS94_RS04505 | Not Available | - | 871443 - 872801 | 50284.0 |
| deor/glpr family dna-binding transcription regulator | DFS94_RS04510 | Not Available | - | 872919 - 873677 | 28238.0 |
| nadh-dependent methylglyoxal reductase | DFS94_RS04515 | Not Available | - | 873814 - 874794 | 36258.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism