Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| environmental stress-induced protein ves | DFS94_RS04370 | Not Available | - | 843608 - 844183 | 21609.1 |
| atp-independent periplasmic protein-refolding chaperone spy | DFS94_RS04375 | Not Available | - | 844386 - 844871 | 18173.1 |
| succinylglutamate desuccinylase | DFS94_RS04380 | Not Available | - | 845201 - 846169 | 35857.4 |
| n-succinylarginine dihydrolase | DFS94_RS04385 | Not Available | - | 846162 - 847505 | 49321.5 |
| succinylglutamate-semialdehyde dehydrogenase | DFS94_RS04390 | Not Available | - | 847502 - 848980 | 53182.5 |
| arginine n-succinyltransferase | DFS94_RS04395 | Not Available | - | 848977 - 850011 | 38486.0 |
| succinylornithine/acetylornithine transaminase | DFS94_RS04400 | Not Available | - | 850008 - 851228 | 43620.7 |
| exodeoxyribonuclease iii | DFS94_RS04405 | Not Available | + | 851674 - 852480 | 30968.9 |
| tvp38/tmem64 family protein | DFS94_RS04410 | Not Available | + | 852647 - 853357 | 26068.7 |
| lipoprotein ydjy | DFS94_RS04415 | Not Available | + | 853362 - 854039 | 24156.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism