Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | DFS94_RS04070 | Not Available | - | 783311 - 784057 | 27633.1 |
| fe-s cluster assembly protein sufb | DFS94_RS04075 | Not Available | - | 784067 - 785554 | 54728.1 |
| fe-s cluster assembly scaffold sufa | DFS94_RS04080 | Not Available | - | 785563 - 785931 | 13314.9 |
| ydih family protein | DFS94_RS04085 | Not Available | - | 786480 - 786668 | 7266.74 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | DFS94_RS04090 | Not Available | - | 786768 - 787178 | 14940.2 |
| fad-binding and (fe-s)-binding domain-containing protein | DFS94_RS04095 | Not Available | - | 787175 - 790231 | 113257.0 |
| ai-2e family transporter ydik | DFS94_RS04100 | Not Available | + | 790445 - 791557 | 39833.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | + | 791743 - 791850 | Not Available |
| ydil family protein | DFS94_RS04110 | Not Available | + | 791986 - 792342 | 13907.6 |
| mfs transporter | DFS94_RS04115 | Not Available | + | 792442 - 793656 | 44597.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism