Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde ferredoxin oxidoreductase | DFS94_RS04025 | Not Available | - | 773274 - 775376 | 77866.8 |
| ferredoxin-like protein | DFS94_RS04030 | Not Available | - | 775397 - 776023 | 22357.2 |
| fumarate hydratase fumd | DFS94_RS04035 | Not Available | - | 776479 - 776688 | 7907.85 |
| hypothetical protein | DFS94_RS25900 | Not Available | + | 777043 - 777237 | 7559.0 |
| pyruvate kinase pykf | DFS94_RS04040 | Not Available | + | 777245 - 778657 | 50732.5 |
| murein lipoprotein lpp | DFS94_RS04045 | Not Available | + | 778968 - 779204 | 8323.95 |
| l,d-transpeptidase ldte | DFS94_RS04050 | Not Available | - | 779267 - 780271 | 36040.4 |
| cysteine desulfuration protein sufe | DFS94_RS04055 | Not Available | - | 780419 - 780835 | 15759.2 |
| cysteine desulfurase sufs | DFS94_RS04060 | Not Available | - | 780848 - 782068 | 44394.3 |
| fe-s cluster assembly protein sufd | DFS94_RS04065 | Not Available | - | 782065 - 783336 | 46754.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism