Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m66 family glycomucinase stce | ARC77_RS28475 | Not Available | + | 2886 - 5582 | 99553.9 |
| type ii secretion system protein gspc | ARC77_RS28480 | Not Available | + | 5669 - 6544 | 32303.4 |
| variant type ii secretion system secretin etpd | ARC77_RS28485 | Not Available | + | 6545 - 8512 | 71495.6 |
| type ii secretion system atpase gspe | ARC77_RS28490 | Not Available | + | 8512 - 10017 | 55932.5 |
| type ii secretion system inner membrane protein gspf | ARC77_RS28495 | Not Available | + | 10019 - 11242 | 44900.6 |
| type ii secretion system major pseudopilin gspg | ARC77_RS28500 | Not Available | + | 11273 - 11707 | 16239.4 |
| type ii secretion system minor pseudopilin gsph | ARC77_RS28505 | Not Available | + | 11704 - 12258 | 20775.2 |
| type ii secretion system minor pseudopilin gspi | ARC77_RS28510 | Not Available | + | 12273 - 12620 | 12777.4 |
| type ii secretion system minor pseudopilin gspj | ARC77_RS28515 | Not Available | + | 12617 - 13216 | 22705.6 |
| type ii secretion system minor pseudopilin gspk | ARC77_RS28520 | Not Available | + | 13213 - 14190 | 36853.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism