Escherichia coli str. 28RC1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 28RC1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0 °C, which aligns with the normal body temperature of many host organisms, suggesting a potential adaptation to life within a host-associated habitat. As a facultative anaerobe, E. coli str. 28RC1 can survive in both aerobic and anaerobic environments, allowing it to exploit a diverse range of ecological niches within the host. The structural characteristics of this strain, such as its rod shape and specific cell arrangement, may contribute to its interactions within the host environment. The ability to form pairs could facilitate cellular communication or biofilm formation under certain conditions, enhancing its survival and functionality within the host. This strain exemplifies the metabolic versatility and adaptability often seen in E. coli, emphasizing its potential role in various host-associated ecosystems. Understanding these traits may provide insights into the ecological dynamics and functional roles that E. coli str. 28RC1 plays in its specific habitat, which could be crucial for deciphering its interactions with both the host and other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 28RC1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 28RC1

Accession NumberNZ_CP015020.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4589 genes

Non-Coding Genes

1027 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
oligopeptide abc transporter substrate-binding protein oppaARC77_RS27825Not Available+5463751 - 546538260979.1
oligopeptide abc transporter permease oppbARC77_RS27830Not Available+5465468 - 546638833445.3
oligopeptide abc transporter permease oppcARC77_RS27835Not Available+5466403 - 546731133023.9
murein tripeptide/oligopeptide abc transporter atp-binding protein oppdARC77_RS27840Not Available+5467323 - 546833637167.7
murein tripeptide/oligopeptide abc transporter atp-binding protein oppfARC77_RS27845Not Available+5468333 - 546933737183.8
hi1450 family dsdna-mimic proteinARC77_RS27850Not Available-5469390 - 546971912687.7
cardiolipin synthaseARC77_RS27855Not Available-5469754 - 547121454792.5
yciy family proteinARC77_RS33180Not Available+5471357 - 54715307102.81
voltage-gated potassium channel proteinARC77_RS27865Not Available-5471585 - 547283846080.2
ycii family proteinARC77_RS27870Not Available-5473139 - 547343510602.6

Displaying genes 5601 – 5610 of 5616 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites