Escherichia coli str. 28RC1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 28RC1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0 °C, which aligns with the normal body temperature of many host organisms, suggesting a potential adaptation to life within a host-associated habitat. As a facultative anaerobe, E. coli str. 28RC1 can survive in both aerobic and anaerobic environments, allowing it to exploit a diverse range of ecological niches within the host. The structural characteristics of this strain, such as its rod shape and specific cell arrangement, may contribute to its interactions within the host environment. The ability to form pairs could facilitate cellular communication or biofilm formation under certain conditions, enhancing its survival and functionality within the host. This strain exemplifies the metabolic versatility and adaptability often seen in E. coli, emphasizing its potential role in various host-associated ecosystems. Understanding these traits may provide insights into the ecological dynamics and functional roles that E. coli str. 28RC1 plays in its specific habitat, which could be crucial for deciphering its interactions with both the host and other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 28RC1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 28RC1

Accession NumberNZ_CP015020.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4589 genes

Non-Coding Genes

1027 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
iron abc transporter permeaseARC77_RS27570Not Available-5408868 - 540984834807.2
iron abc transporter substrate-binding proteinARC77_RS27575Not Available-5409848 - 541087037643.4
duf1441 family proteinARC77_RS27580Not Available-5411206 - 541289061230.7
dihydroxyacetone kinase phosphoryl donor subunit dhamARC77_RS27585Not Available-5413210 - 541462851511.7
dihydroxyacetone kinase subunit dhalARC77_RS27590Not Available-5414639 - 541527122708.2
dihydroxyacetone kinase subunit dhakARC77_RS27595Not Available-5415282 - 541635238117.2
dihydroxyacetone kinase operon transcriptional regulator dharARC77_RS27600Not Available+5416580 - 541849970565.9
autotransporter outer membrane beta-barrel domain-containing proteinARC77_RS27605Not Available-5418599 - 5421484100347.0
redox-regulated atpase ychfARC77_RS27615Not Available-5422328 - 542341939669.6
aminoacyl-trna hydrolaseARC77_RS27620Not Available-5423536 - 542412021083.5

Displaying genes 5551 – 5560 of 5616 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites