Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber component j | ARC77_RS28185 | Not Available | + | 5517466 - 5520321 | 103640.0 |
| Putative lom-like outer membrane protein | ARC77_RS28190 | Not Available | + | 5520389 - 5520988 | 21981.3 |
| Putative tail fiber protein | ARC77_RS28195 | Not Available | + | 5521140 - 5522444 | 43770.8 |
| Putative tail fiber protein | ARC77_RS28200 | Not Available | + | 5522446 - 5522715 | 10016.2 |
| duf1076 domain-containing protein | ARC77_RS31175 | Not Available | + | 5522828 - 5523402 | 20974.4 |
| Nlea4795 protein | ARC77_RS28205 | Not Available | - | 5523742 - 5525067 | 47639.1 |
| tyrosine-type recombinase/integrase | ARC77_RS28210 | Not Available | - | 5525728 - 5526722 | 36405.8 |
| Tail fiber protein | ARC77_RS33950 | Not Available | + | 5526716 - 5526787 | 2684.33 |
| Hypothetical protein | ARC77_RS28215 | Not Available | + | 5526894 - 5527805 | 33684.6 |
| t3ss effector caspase inhibitor nlef | ARC77_RS28220 | Not Available | + | 5527871 - 5528440 | 21389.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism