Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | ARC77_RS20510 | Not Available | - | 4023821 - 4025212 | 52563.2 |
| hypothetical protein | ARC77_RS20515 | Not Available | - | 4025263 - 4025487 | 8411.01 |
| type vi secretion system contractile sheath small subunit | ARC77_RS20520 | Not Available | - | 4025522 - 4026022 | 18070.5 |
| hcp family type vi secretion system effector | ARC77_RS20530 | Not Available | + | 4026719 - 4027237 | 19256.8 |
| type vi secretion system tip protein vgrg | ARC77_RS20540 | Not Available | + | 4027447 - 4029588 | 79573.0 |
| rhs element core protein | ARC77_RS20545 | Not Available | + | 4029664 - 4033905 | 158319.0 |
| ankyrin repeat domain-containing protein | ARC77_RS20550 | Not Available | + | 4034012 - 4034761 | 28084.8 |
| duf1441 family protein | ARC77_RS20555 | Not Available | + | 4034967 - 4036451 | 56424.9 |
| sel1 repeat family protein | ARC77_RS20560 | Not Available | + | 4036520 - 4037125 | 22300.3 |
| isas1 family transposase | ARC77_RS20575 | Not Available | + | 4037871 - 4039007 | 43065.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism