Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | ARC77_RS20460 | Not Available | - | 4011560 - 4012972 | 52393.3 |
| type vi secretion system-associated protein vasi | ARC77_RS20465 | Not Available | - | 4012977 - 4013720 | 26416.7 |
| type vi secretion system atpase tssh | ARC77_RS20470 | Not Available | - | 4013717 - 4016482 | 101019.0 |
| type ivb secretion system protein icmh/dotu | ARC77_RS20475 | Not Available | - | 4016491 - 4017252 | 29371.8 |
| type vi secretion system baseplate subunit tssk | ARC77_RS20480 | Not Available | - | 4017257 - 4018588 | 49986.8 |
| type vi secretion system lipoprotein tssj | ARC77_RS20485 | Not Available | - | 4018591 - 4019115 | 19424.0 |
| type vi secretion system-associated fha domain protein tagh | ARC77_RS20490 | Not Available | - | 4019112 - 4020392 | 47363.7 |
| type vi secretion system baseplate subunit tssg | ARC77_RS20495 | Not Available | - | 4020417 - 4021499 | 40232.0 |
| type vi secretion system baseplate subunit tssf | ARC77_RS20500 | Not Available | - | 4021463 - 4023313 | 71190.0 |
| type vi secretion system baseplate subunit tsse | ARC77_RS20505 | Not Available | - | 4023317 - 4023730 | 15510.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism