Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | ARC77_RS20260 | Not Available | + | 3974553 - 3975512 | 35243.6 |
| lysine decarboxylase ldcc | ARC77_RS20265 | Not Available | + | 3975611 - 3977752 | 80511.8 |
| voc family protein | ARC77_RS20270 | Not Available | + | 3977809 - 3978198 | 14707.4 |
| trna lysidine(34) synthetase tils | ARC77_RS20275 | Not Available | + | 3978263 - 3979558 | 47881.4 |
| rho-binding antiterminator | ARC77_RS20280 | Not Available | - | 3979611 - 3979871 | 9698.45 |
| yaep family protein | ARC77_RS20285 | Not Available | - | 3979858 - 3980058 | 7214.59 |
| yaeq family protein | ARC77_RS20290 | Not Available | + | 3980224 - 3980769 | 20849.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | ARC77_RS20295 | Not Available | + | 3980766 - 3981176 | 15137.3 |
| envelope stress response activation lipoprotein nlpe | ARC77_RS20300 | Not Available | + | 3981190 - 3981900 | 25855.7 |
| yaef family permuted papain-like enzyme | ARC77_RS20305 | Not Available | - | 3982100 - 3982924 | 30072.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism