Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | ARC77_RS19660 | Not Available | + | 3838786 - 3839550 | 28199.7 |
| thiamine abc transporter atp-binding protein thiq | ARC77_RS19665 | Not Available | - | 3839637 - 3840335 | 25026.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | ARC77_RS19670 | Not Available | - | 3840319 - 3841929 | 59398.5 |
| thiamine abc transporter substrate binding subunit | ARC77_RS19675 | Not Available | - | 3841905 - 3842888 | 36177.3 |
| t3ss effector espy2 | ARC77_RS19680 | Not Available | + | 3843260 - 3843829 | 21439.3 |
| dna-binding transcriptional regulator sgrr | ARC77_RS19685 | Not Available | - | 3844058 - 3845716 | 64123.8 |
| glucose uptake inhibitor sgrt | ARC77_RS19690 | Not Available | + | 3845805 - 3845936 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | ARC77_RS19695 | Not Available | - | 3846044 - 3846649 | 22520.7 |
| 3-isopropylmalate dehydratase large subunit | ARC77_RS19700 | Not Available | - | 3846660 - 3848060 | 49900.8 |
| 3-isopropylmalate dehydrogenase | ARC77_RS19705 | Not Available | - | 3848063 - 3849154 | 39517.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism