Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ytfb | ARC77_RS18315 | Not Available | - | 3545346 - 3545984 | 23555.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ARC77_RS18320 | Not Available | + | 3546202 - 3546822 | 22217.5 |
| d-serine/d-alanine/glycine transporter | ARC77_RS18325 | Not Available | + | 3547131 - 3548543 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | ARC77_RS18330 | Not Available | - | 3548588 - 3549250 | 24853.1 |
| dmt family transporter | ARC77_RS18335 | Not Available | - | 3549358 - 3550323 | 35266.7 |
| nad(p)h:quinone oxidoreductase | ARC77_RS18340 | Not Available | - | 3550431 - 3551291 | 29827.3 |
| helix-turn-helix domain-containing protein | ARC77_RS18345 | Not Available | + | 3551380 - 3551760 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | ARC77_RS18350 | Not Available | - | 3551878 - 3553821 | 70909.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | ARC77_RS18355 | Not Available | + | 3554011 - 3554751 | 27161.3 |
| protein ytfi | ARC77_RS18360 | Not Available | + | 3554963 - 3555901 | 35915.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism