Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase cada | ARC77_RS17925 | Not Available | - | 3472713 - 3474860 | 81264.7 |
| cadaverine/lysine antiporter | ARC77_RS17930 | Not Available | - | 3474940 - 3476274 | 46667.8 |
| lysine decarboxylation/transport transcriptional activator cadc | ARC77_RS17935 | Not Available | - | 3476640 - 3478178 | 57816.1 |
| duf1441 family protein | ARC77_RS34260 | Not Available | - | 3478438 - 3478597 | 6014.13 |
| Trna-phe | Not Available | Not Available | + | 3478795 - 3478870 | Not Available |
| transcriptional regulator | ARC77_RS17950 | Not Available | - | 3478977 - 3479552 | 21932.3 |
| protein-disulfide reductase dsbd | ARC77_RS17955 | Not Available | - | 3479589 - 3481286 | 61833.7 |
| divalent cation tolerance protein cuta | ARC77_RS17960 | Not Available | - | 3481262 - 3481600 | 12331.7 |
| anaerobic c4-dicarboxylate transporter dcua | ARC77_RS17965 | Not Available | - | 3481716 - 3483017 | 45753.5 |
| aspartate ammonia-lyase | ARC77_RS17970 | Not Available | - | 3483135 - 3484571 | 52359.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism