Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | ARC77_RS03395 | Not Available | - | 642349 - 643017 | 25494.4 |
| phage shock protein operon transcriptional activator | ARC77_RS03400 | Not Available | + | 643184 - 644161 | 36962.6 |
| 4-aminobutyrate transaminase | ARC77_RS03405 | Not Available | - | 644292 - 645557 | 44803.9 |
| gamma-glutamylputrescine oxidase | ARC77_RS03410 | Not Available | - | 645595 - 646875 | 47135.2 |
| aldehyde dehydrogenase puuc | ARC77_RS03415 | Not Available | - | 646877 - 648364 | 53286.3 |
| hth-type transcriptional regulator puur | ARC77_RS03420 | Not Available | - | 648514 - 649071 | 20106.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | ARC77_RS03425 | Not Available | - | 649098 - 649862 | 28086.7 |
| glutamate-putrescine ligase | ARC77_RS03430 | Not Available | + | 650074 - 651492 | 53210.3 |
| hypothetical protein | ARC77_RS32445 | Not Available | + | 651641 - 651805 | 5913.2 |
| putrescine/proton symporter puup | ARC77_RS03435 | Not Available | + | 651795 - 653180 | 50888.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism