Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 28RC1
Accession NumberNZ_CP015020.1
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transposase | ARC77_RS32235 | Not Available | - | 5528487 - 5529121 | 23306.5 |
| Transposase | ARC77_RS28235 | Not Available | - | 5529406 - 5530944 | 57746.1 |
| Transposase | ARC77_RS28240 | Not Available | - | 5530994 - 5531341 | 12771.9 |
| Truncated transposase | ARC77_RS28245 | Not Available | - | 5531338 - 5531718 | 14071.0 |
| hypothetical protein | ARC77_RS28250 | Not Available | - | 5532058 - 5532336 | 10353.2 |
| Attr | Not Available | Not Available | + | 5532601 - 5532612 | Not Available |
| hypothetical protein | ARC77_RS31185 | Not Available | + | 5532764 - 5532910 | 5184.08 |
| Hypothetical protein | ARC77_RS28255 | Not Available | - | 5533047 - 5533694 | 24583.5 |
| t3ss effector guanine nucleotide exchange factor espm1 | ARC77_RS28260 | Not Available | + | 5533878 - 5534468 | 21855.2 |
| Putative transposase | ARC77_RS32240 | Not Available | - | 5534687 - 5535743 | 38547.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism