Escherichia coli str. 256

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 256 is a Gram-negative, rod-shaped bacterium that typically occurs in pairs or as single cells. This strain thrives optimally at 37.0°C, which is indicative of its adaptation to warm-blooded hosts, aligning with its habitat as a host-associated microbe. E. coli str. 256 exhibits facultative anaerobic respiration, allowing it to survive in both aerobic and anaerobic environments, a trait that enhances its versatility in various ecological niches within the host. This adaptability may facilitate its role in the gut microbiome, where it can contribute to digestive processes while competing with other microorganisms. E. coli is known for its ability to metabolize a wide range of substrates, which may reflect its evolutionary success in diverse host-associated environments. Understanding the traits of E. coli str. 256 not only contributes to our knowledge of this specific strain but also highlights the ecological complexities of intestinal microbiota, where such bacteria play crucial roles in maintaining host health and influencing metabolic pathways.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 256
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 256

Accession NumberNZ_CM007610.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

146 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
fertility inhibition protein finoBMT53_RS00005Not Available-142 - 69921212.7
transposaseBMT53_RS00010Not Available-735 - 104611087.4
hypothetical proteinBMT53_RS31570Not Available-998 - 11535791.18
transposaseBMT53_RS00015Not Available-1191 - 192626917.5
transposaseBMT53_RS31070Not Available-1946 - 7202182204.0
type iv conjugative transfer system coupling protein tradBMT53_RS00035Not Available-7202 - 947286088.7
hypothetical proteinBMT53_RS00040Not Available-9529 - 1026027623.8
hypothetical proteinBMT53_RS00045Not Available-10428 - 106889940.78
conjugal transfer complement resistance protein tratBMT53_RS00050Not Available-10748 - 1147926040.3
hypothetical proteinBMT53_RS00055Not Available-11528 - 1200718283.3

Displaying genes 1 – 10 of 5722 in total

Pathways

12367 pathways

Metabolites

166 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001988(R)-mevalonateC6H11O4Chemical structure of (R)-mevalonateNot available
Average147.1491Da
Monoisotopic147.0657338Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da

Displaying 31–40 of 166 metabolites