Escherichia coli str. SLK172

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SLK172 is a Gram-negative, rod-shaped bacterium that commonly exists in a host-associated habitat. This strain exhibits a cellular arrangement primarily in pairs and singles, reflecting its typical morphology within diverse environments. E. coli SLK172 thrives optimally at a temperature of 37.0°C, which aligns with the physiological conditions found in the intestines of warm-blooded hosts. As a facultative anaerobe, E. coli SLK172 possesses the metabolic flexibility to grow in both the presence and absence of oxygen, enabling it to adapt to varying oxygen levels within its host environment. This adaptability is crucial for survival in the dynamic conditions of the gastrointestinal tract, where oxygen availability can fluctuate significantly due to microbial activity and host physiology. The association of E. coli SLK172 with host organisms suggests potential roles in nutrient metabolism and microbial community dynamics within the gut ecosystem. Understanding the specific interactions of this strain with its host could provide insights into its contributions to health and disease, as well as its potential influence on the overall gut microbiome. Such knowledge may further illuminate the ecological significance of E. coli strains in maintaining gut homeostasis and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. SLK172
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. SLK172

Accession NumberNZ_CP017633.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

150 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is110-like element is5075 family transposaseBJJ90_RS31180Not Available+43891 - 4489537527.7
is1 family transposaseBJJ90_RS34375Not Available-45167 - 452533436.24
sulfonamide-resistant dihydropteroate synthase sul2BJJ90_RS31195Not Available+45583 - 4639828471.1
aminoglycoside o-phosphotransferase aph(3'')-ibBJJ90_RS31200Not Available+46459 - 4726229588.2
aminoglycoside o-phosphotransferase aph(6)-idBJJ90_RS31205Not Available+47262 - 4809830825.7
hypothetical proteinBJJ90_RS31220Not Available+48404 - 486499020.85
tetracycline resistance transcriptional repressor tetr(a)BJJ90_RS31225Not Available-48678 - 4932823379.7
tetracycline efflux mfs transporter tet(a)BJJ90_RS31230Not Available+49434 - 5063342380.7
is1 family transposaseBJJ90_RS33190Not Available-50600 - 507887406.65
lysr family transcriptional regulatorBJJ90_RS31240Not Available-50900 - 5120511146.6

Displaying genes 51 – 60 of 150 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites