Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. S17-1
Accession NumberNZ_CP040667.1
Gene Summary
Adenine Count
1169311 bp
Thymine Count
1172641 bp
Guanine Count
1216006 bp
Cytosine Count
1214332 bp
Genome Length
4772290 bp
Protein-coding Genes
4350 genes
Non-Coding Genes
352 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase cada | FGH86_RS18820 | Not Available | + | 3818732 - 3820879 | 81264.7 |
| dipeptide/tripeptide permease dtpc | FGH86_RS18825 | Not Available | + | 3820938 - 3822395 | 53057.8 |
| lysine--trna ligase | FGH86_RS18830 | Not Available | + | 3822632 - 3824149 | 57829.9 |
| type v toxin-antitoxin system toxin ghot | FGH86_RS18835 | Not Available | - | 3824268 - 3824441 | 6555.44 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FGH86_RS18840 | Not Available | - | 3824469 - 3824765 | 11468.6 |
| gnat family n-acetyltransferase | FGH86_RS18845 | Not Available | - | 3824992 - 3825264 | 10468.7 |
| 4fe-4s mono-cluster protein yjdi | FGH86_RS18850 | Not Available | - | 3825276 - 3825506 | 8550.35 |
| sensor histidine kinase | FGH86_RS18855 | Not Available | + | 3825687 - 3827318 | 60568.4 |
| two-component system response regulator dcur | FGH86_RS18860 | Not Available | + | 3827315 - 3828034 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | FGH86_RS18865 | Not Available | + | 3828605 - 3829945 | 47938.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism