Escherichia coli str. HPCN26

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain HPCN26 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells. It is classified as a facultative anaerobe, indicating its ability to grow in both aerobic and anaerobic environments. This strain thrives optimally at a temperature of 37.0°C, which corresponds to the average body temperature of warm-blooded hosts, suggesting its adaptation to a host-associated habitat. As a member of the Escherichia coli species, HPCN26 likely shares common physiological traits with other strains, including versatility in nutrient utilization and metabolic pathways. The facultative anaerobic nature allows it to survive in various environments, including those within the gastrointestinal tract of hosts, where oxygen levels may fluctuate. This adaptability is crucial for colonization, survival, and potential interactions with the host's immune system. The ecological significance of Escherichia coli HPCN26 may extend beyond its basic metabolic capabilities, as it may play a role in the microbial communities associated with its host, contributing to the balance of gut microbiota. The presence of such strains highlights the importance of understanding microbial dynamics within host-associated environments, which can influence nutrient absorption and overall health. Further research on HPCN26 could provide insights into its specific roles within these complex ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. HPCN26
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. HPCN26

Accession NumberQMKN00000000.1

Gene Summary

Adenine Count

1359008 bp

Thymine Count

1364318 bp

Guanine Count

1328836 bp

Cytosine Count

1338252 bp

Genome Length

5390414 bp

Protein-coding Genes

5232 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna polymerase sigma-54 factorDQE83_16490Not Available-3341335 - 334276854023.9
abc transporter atp-binding proteinDQE83_16495Not Available-3342816 - 334354126802.3
lipopolysaccharide abc transporter substrate-binding protein lptaDQE83_16500Not Available-3343548 - 334410520128.1
lps export abc transporter periplasmic protein lptcDQE83_16505Not Available-3344074 - 334464921703.8
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdscDQE83_16510Not Available-3344646 - 334521220015.3
arabinose-5-phosphate isomerase kdsdDQE83_16515Not Available-3345233 - 334621935160.2
calcium/sodium antiporterDQE83_16520Not Available-3346233 - 334721034814.9
phospholipid abc transporter atp-binding protein mlafDQE83_16525Not Available+3347420 - 334822929098.6
phospholipid abc transporter permeaseDQE83_16530Not Available+3348237 - 334901927865.0
outer membrane lipid asymmetry maintenance protein mladDQE83_16535Not Available+3349024 - 334957519577.3

Displaying genes 3351 – 3360 of 5523 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites