Escherichia coli str. EK2009

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EK2009 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It has an optimal growth temperature of 37.0°C, which aligns with the average body temperature of warm-blooded hosts, suggesting its adaptation to a host-associated habitat. E. coli is widely recognized for its role in the gastrointestinal tract of various organisms, where it plays a critical part in the microbiome and digestive processes. The facultative anaerobic nature of strain EK2009 allows it to metabolize nutrients efficiently in the presence or absence of oxygen, contributing to its survival and proliferation in diverse niches within host environments. The existence of E. coli strain EK2009 in a host-associated habitat underscores its potential interactions with the host's immune system and other microbial inhabitants. This strain may participate in complex microbial communities, influencing gut health and nutrient absorption. Understanding the specific traits of strain EK2009 can provide insights into its ecological roles and functional contributions within host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EK2009
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EK2009

Accession NumberNZ_CP040663.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4236 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lps translocon maturation chaperone lptmFE383_RS19310Not Available+3957919 - 39581227177.59
diaminopimelate epimeraseFE383_RS19315Not Available+3958159 - 395898330210.4
duf484 domain-containing proteinFE383_RS19320Not Available+3958980 - 395968726730.4
tyrosine recombinase xercFE383_RS19325Not Available+3959684 - 396058033869.7
5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigbFE383_RS19330Not Available+3960580 - 396129627123.4
dna helicase iiFE383_RS19335Not Available+3961380 - 396354281994.7
phosphodiester glycosidase family proteinFE383_RS19340Not Available-3963689 - 396445327910.0
protein ysgdFE383_RS22565Not Available+3964615 - 39646712140.55
magnesium/cobalt transporter coraFE383_RS19345Not Available+3964823 - 396577336591.8
duf2628 domain-containing proteinFE383_RS19350Not Available-3965816 - 396619614550.0

Displaying genes 3891 – 3900 of 4503 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites