Escherichia coli str. EK2009

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EK2009 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It has an optimal growth temperature of 37.0°C, which aligns with the average body temperature of warm-blooded hosts, suggesting its adaptation to a host-associated habitat. E. coli is widely recognized for its role in the gastrointestinal tract of various organisms, where it plays a critical part in the microbiome and digestive processes. The facultative anaerobic nature of strain EK2009 allows it to metabolize nutrients efficiently in the presence or absence of oxygen, contributing to its survival and proliferation in diverse niches within host environments. The existence of E. coli strain EK2009 in a host-associated habitat underscores its potential interactions with the host's immune system and other microbial inhabitants. This strain may participate in complex microbial communities, influencing gut health and nutrient absorption. Understanding the specific traits of strain EK2009 can provide insights into its ecological roles and functional contributions within host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EK2009
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EK2009

Accession NumberNZ_CP040663.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4236 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
atp-dependent rna helicase rhlbFE383_RS19160Not Available-3927762 - 392902747128.7
thioredoxin trxaFE383_RS19165Not Available+3929158 - 392948711807.2
rho operon leader peptide rholFE383_RS19170Not Available+3929628 - 39297293750.4
transcription termination factor rhoFE383_RS19175Not Available+3929814 - 393107347007.1
udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferaseFE383_RS19180Not Available+3931313 - 393241640959.7
eca polysaccharide chain length modulation proteinFE383_RS19185Not Available+3932428 - 393347439491.3
non-hydrolyzing udp-n-acetylglucosamine 2-epimeraseFE383_RS19190Not Available+3933530 - 393466042247.1
udp-n-acetyl-d-mannosamine dehydrogenaseFE383_RS19195Not Available+3934657 - 393591945841.3
dtdp-glucose 4,6-dehydrataseFE383_RS19200Not Available+3935919 - 393698639755.9
glucose-1-phosphate thymidylyltransferase rfbaFE383_RS19205Not Available+3937005 - 393788632736.3

Displaying genes 3861 – 3870 of 4503 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites