Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. EK2009
Accession NumberNZ_CP040663.1
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | FE383_RS18005 | Not Available | - | 3685866 - 3687935 | 76817.2 |
| glycine--trna ligase subunit alpha | FE383_RS18010 | Not Available | - | 3687945 - 3688856 | 34718.2 |
| ysab family lipoprotein | FE383_RS18015 | Not Available | - | 3688951 - 3689250 | 11336.8 |
| o-acetyltransferase wech | FE383_RS18020 | Not Available | + | 3689425 - 3690420 | 37572.1 |
| inner membrane protein yiaa | FE383_RS18025 | Not Available | - | 3690462 - 3690899 | 16123.6 |
| inner membrane protein yiab | FE383_RS18030 | Not Available | - | 3690945 - 3691286 | 12555.9 |
| xylulokinase | FE383_RS18035 | Not Available | - | 3691455 - 3692909 | 52621.3 |
| xylose isomerase | FE383_RS18040 | Not Available | - | 3692981 - 3694303 | 49744.7 |
| d-xylose abc transporter substrate-binding protein | FE383_RS18045 | Not Available | + | 3694669 - 3695661 | 35736.1 |
| d-xylose abc transporter atp-binding protein | FE383_RS18050 | Not Available | + | 3695739 - 3697280 | 56474.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism