Escherichia coli str. EK2009

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EK2009 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It has an optimal growth temperature of 37.0°C, which aligns with the average body temperature of warm-blooded hosts, suggesting its adaptation to a host-associated habitat. E. coli is widely recognized for its role in the gastrointestinal tract of various organisms, where it plays a critical part in the microbiome and digestive processes. The facultative anaerobic nature of strain EK2009 allows it to metabolize nutrients efficiently in the presence or absence of oxygen, contributing to its survival and proliferation in diverse niches within host environments. The existence of E. coli strain EK2009 in a host-associated habitat underscores its potential interactions with the host's immune system and other microbial inhabitants. This strain may participate in complex microbial communities, influencing gut health and nutrient absorption. Understanding the specific traits of strain EK2009 can provide insights into its ecological roles and functional contributions within host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EK2009
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EK2009

Accession NumberNZ_CP040663.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4236 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nitroreductase nfsaFE383_RS04295Not Available+880373 - 88109526802.2
30s ribosomal protein s6--l-glutamate ligaseFE383_RS04300Not Available+881156 - 88205832438.5
ybjn domain-containing proteinFE383_RS04305Not Available+882146 - 88262217685.1
spermidine/putrescine abc transporter substrate-binding protein potfFE383_RS04310Not Available+882973 - 88408540841.7
putrescine abc transporter atp-binding subunit potgFE383_RS04315Not Available+884180 - 88531341933.3
putrescine abc transporter permease pothFE383_RS04320Not Available+885323 - 88627635491.6
putrescine abc transporter permease potiFE383_RS04325Not Available+886273 - 88711830542.4
ybjo family proteinFE383_RS04330Not Available+887178 - 88766618519.1
23s rrna (uracil(747)-c(5))-methyltransferase rlmcFE383_RS04335Not Available+887707 - 88883441958.1
hypothetical proteinFE383_RS22720Not Available+888885 - 8889833301.04

Displaying genes 1011 – 1020 of 4503 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites