Escherichia coli str. EcSS20

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EcSS20 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, which is indicative of its versatile metabolic capabilities. Optimal growth for EcSS20 occurs at a temperature of 37.0 degrees Celsius, a characteristic that aligns with its association with host organisms, where it is often found in the gastrointestinal tract. The habitat of E. coli str. EcSS20 suggests a close relationship with its host, potentially playing a role in the microbiota that contributes to the host’s gut health. The ability to adapt to varying oxygen levels enhances its survival in the complex and dynamic conditions of the intestinal environment. The specific traits of E. coli str. EcSS20 may offer insights into its functional role in nutrient metabolism and interaction with the host immune system, underscoring the importance of understanding such strains in the broader context of microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EcSS20
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EcSS20

Accession NumberSDDW00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4543 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
peptidoglycan-binding protein lysmERL57_21895Not Available-4564254 - 456470316064.0
yqae/pmp3 family membrane proteinERL57_21900Not Available-4564787 - 45649455865.57
transcriptional regulatorERL57_21905Not Available+4565128 - 456542710596.9
thiosulfate sulfurtransferase ygapERL57_21910Not Available+4565437 - 456596118630.8
dna-binding protein stpaERL57_21915Not Available-4566008 - 456641215348.4
l-alanine exporter alaeERL57_21920Not Available+4567080 - 456752916902.0
duf2002 family proteinERL57_21925Not Available-4567566 - 456791013066.5
duf883 domain-containing proteinERL57_21930Not Available+4568062 - 456839111847.9
plp-dependent aminotransferase family proteinERL57_21935Not Available-4568448 - 456978249766.2
carboxymuconolactone decarboxylase family proteinERL57_21940Not Available+4569870 - 457030116177.4

Displaying genes 4321 – 4330 of 4794 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites