Escherichia coli str. EcSS20

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EcSS20 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, which is indicative of its versatile metabolic capabilities. Optimal growth for EcSS20 occurs at a temperature of 37.0 degrees Celsius, a characteristic that aligns with its association with host organisms, where it is often found in the gastrointestinal tract. The habitat of E. coli str. EcSS20 suggests a close relationship with its host, potentially playing a role in the microbiota that contributes to the host’s gut health. The ability to adapt to varying oxygen levels enhances its survival in the complex and dynamic conditions of the intestinal environment. The specific traits of E. coli str. EcSS20 may offer insights into its functional role in nutrient metabolism and interaction with the host immune system, underscoring the importance of understanding such strains in the broader context of microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EcSS20
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EcSS20

Accession NumberSDDW00000000.1

Gene Summary

Adenine Count

1232373 bp

Thymine Count

1236884 bp

Guanine Count

1267441 bp

Cytosine Count

1249670 bp

Genome Length

4993062 bp

Protein-coding Genes

4543 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cytosol nonspecific dipeptidaseERL57_20510Not Available-4274038 - 427549552920.4
xanthine phosphoribosyltransferaseERL57_20515Not Available+4275756 - 427621416971.6
esterase frsaERL57_20520Not Available+4276306 - 427755046997.4
sigma factor-binding protein crlERL57_20525Not Available+4277608 - 427800915653.7
phosphoporin phoeERL57_20530Not Available-4278048 - 427910338982.1
glutamate 5-kinaseERL57_20535Not Available+4279391 - 428049439058.9
glutamate-5-semialdehyde dehydrogenaseERL57_20540Not Available+4280505 - 428175844652.6
Trna-thrNot AvailableNot Available+4281873 - 4281948Not Available
duf4102 domain-containing proteinERL57_20550Not Available+4282112 - 428328744778.2
duf2290 domain-containing proteinERL57_20555Not Available-4283316 - 428401727328.9

Displaying genes 4051 – 4060 of 4794 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites