Escherichia coli str. EcSS20

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain EcSS20 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, which is indicative of its versatile metabolic capabilities. Optimal growth for EcSS20 occurs at a temperature of 37.0 degrees Celsius, a characteristic that aligns with its association with host organisms, where it is often found in the gastrointestinal tract. The habitat of E. coli str. EcSS20 suggests a close relationship with its host, potentially playing a role in the microbiota that contributes to the host’s gut health. The ability to adapt to varying oxygen levels enhances its survival in the complex and dynamic conditions of the intestinal environment. The specific traits of E. coli str. EcSS20 may offer insights into its functional role in nutrient metabolism and interaction with the host immune system, underscoring the importance of understanding such strains in the broader context of microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. EcSS20
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. EcSS20

Accession NumberSDDW00000000.1

Gene Summary

Adenine Count

1232373 bp

Thymine Count

1236884 bp

Guanine Count

1267441 bp

Cytosine Count

1249670 bp

Genome Length

4993062 bp

Protein-coding Genes

4543 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transcriptional regulator lsrrERL57_06430Not Available-1362926 - 136387933739.8
autoinducer 2 abc transporter atp-binding protein lsraERL57_06435Not Available+1364129 - 136566455538.6
autoinducer 2 abc transporter permease lsrcERL57_06440Not Available+1365658 - 136668636471.2
autoinducer 2 abc transporter permease lsrdERL57_06445Not Available+1366686 - 136767834492.6
autoinducer 2 abc transporter substrate-binding protein lsrbERL57_06450Not Available+1367690 - 136871236705.9
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseERL57_06455Not Available+1368739 - 136961431852.5
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseERL57_06460Not Available+1369638 - 136992811255.4
trans-aconitate 2-methyltransferaseERL57_06465Not Available+1369985 - 137074328970.3
hypothetical proteinERL57_06470Not Available-1370747 - 137166134855.0
tagaturonate reductaseERL57_06475Not Available-1371858 - 137330954839.4

Displaying genes 1361 – 1370 of 4794 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites