Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malonic semialdehyde reductase | FGC38_RS05965 | Not Available | - | 1205530 - 1206120 | 21571.5 |
| pyrimidine utilization protein d | FGC38_RS05970 | Not Available | - | 1206130 - 1206930 | 28899.7 |
| 3-aminoacrylate deaminase | FGC38_RS05975 | Not Available | - | 1206938 - 1207324 | 13763.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | FGC38_RS05980 | Not Available | - | 1207336 - 1208028 | 25210.0 |
| pyrimidine utilization protein a | FGC38_RS05985 | Not Available | - | 1208028 - 1209119 | 39945.4 |
| hth-type transcriptional regulator rutr | FGC38_RS05995 | Not Available | + | 1209407 - 1210045 | 23688.9 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | FGC38_RS06000 | Not Available | - | 1210085 - 1214047 | 143824.0 |
| hypothetical protein | FGC38_RS06005 | Not Available | + | 1214102 - 1214311 | 7779.91 |
| sodium/proline symporter putp | FGC38_RS06010 | Not Available | + | 1214470 - 1215978 | 54347.3 |
| hypothetical protein | FGC38_RS06015 | Not Available | + | 1216521 - 1217350 | 30723.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism