Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | FGC38_RS19015 | Not Available | + | 3861962 - 3862954 | 35736.1 |
| d-xylose abc transporter atp-binding protein | FGC38_RS19020 | Not Available | + | 3863032 - 3864573 | 56474.0 |
| xylose abc transporter permease xylh | FGC38_RS19025 | Not Available | + | 3864551 - 3865732 | 41033.5 |
| d-xylose utilization transcriptional activator xylr | FGC38_RS19030 | Not Available | + | 3865810 - 3866988 | 44871.7 |
| protein bax | FGC38_RS19035 | Not Available | - | 3867184 - 3868008 | 30869.3 |
| alpha-amylase | FGC38_RS19040 | Not Available | + | 3868328 - 3870358 | 75716.5 |
| valine--pyruvate transaminase | FGC38_RS19045 | Not Available | + | 3870536 - 3871789 | 46714.0 |
| 4fe-4s dicluster domain-containing protein | FGC38_RS19050 | Not Available | - | 3871940 - 3872413 | 17460.2 |
| iclr family transcriptional regulator yiaj | FGC38_RS19055 | Not Available | - | 3872515 - 3873363 | 31068.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | FGC38_RS19060 | Not Available | + | 3873564 - 3874562 | 36574.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism