Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FGC38_RS18770 | Not Available | + | 3805302 - 3806201 | 33331.6 |
| inner membrane protein yhjd | FGC38_RS18775 | Not Available | + | 3806250 - 3807263 | 37913.6 |
| mfs transporter | FGC38_RS18780 | Not Available | + | 3807674 - 3808996 | 47210.9 |
| asma family protein | FGC38_RS18785 | Not Available | - | 3809178 - 3811238 | 74461.8 |
| cyclic-guanylate-specific phosphodiesterase | FGC38_RS18790 | Not Available | - | 3811308 - 3812075 | 29602.9 |
| 2-dehydro-3-deoxygluconokinase | FGC38_RS18795 | Not Available | + | 3812307 - 3813236 | 33964.2 |
| m16 family metallopeptidase | FGC38_RS18800 | Not Available | - | 3813332 - 3814828 | 55530.5 |
| c4-dicarboxylate transporter dctc | FGC38_RS18805 | Not Available | - | 3815049 - 3816335 | 45421.1 |
| biofilm formation regulator hmsp | FGC38_RS18810 | Not Available | - | 3816518 - 3818506 | 74385.9 |
| cellulose synthase complex outer membrane protein bcsc | FGC38_RS18815 | Not Available | - | 3818588 - 3822061 | 127731.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism