Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikb | FGC38_RS18535 | Not Available | + | 3748129 - 3749073 | 35250.3 |
| nickel abc transporter permease subunit nikc | FGC38_RS18540 | Not Available | + | 3749070 - 3749903 | 30363.8 |
| nickel import atp-binding protein nikd | FGC38_RS18545 | Not Available | + | 3749903 - 3750667 | 26822.1 |
| nickel import atp-binding protein nike | FGC38_RS18550 | Not Available | + | 3750664 - 3751470 | 29723.5 |
| nickel-responsive transcriptional regulator nikr | FGC38_RS18555 | Not Available | + | 3751476 - 3751877 | 15094.7 |
| rhs element protein rhsb | FGC38_RS18560 | Not Available | + | 3752080 - 3756315 | 159404.0 |
| protein yhhh | FGC38_RS18565 | Not Available | + | 3756287 - 3756670 | 14531.6 |
| hypothetical protein | FGC38_RS18570 | Not Available | + | 3756775 - 3757125 | 13284.0 |
| isas1-like element isec1 family transposase | FGC38_RS18575 | Not Available | + | 3757266 - 3758402 | 43147.9 |
| abc transporter permease | FGC38_RS18580 | Not Available | - | 3758567 - 3759691 | 41064.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism