Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | FGC38_RS18335 | Not Available | - | 3709953 - 3710480 | 19544.4 |
| gluconate operon transcriptional repressor gntr | FGC38_RS18340 | Not Available | - | 3710619 - 3711614 | 36424.3 |
| quercetin 2,3-dioxygenase | FGC38_RS18345 | Not Available | - | 3711838 - 3712533 | 26280.8 |
| oxidoreductase | FGC38_RS18350 | Not Available | - | 3712656 - 3713693 | 38767.1 |
| n-acetyltransferase | FGC38_RS18355 | Not Available | + | 3714026 - 3714514 | 18794.6 |
| hcp1 family type vi secretion system effector | FGC38_RS18360 | Not Available | + | 3714751 - 3715929 | 44233.9 |
| yrha family protein | FGC38_RS18365 | Not Available | + | 3715926 - 3716342 | 15951.2 |
| is1-like element is1a family transposase | FGC38_RS18370 | Not Available | + | 3716371 - 3717068 | 26455.2 |
| protein yrhd | FGC38_RS18375 | Not Available | + | 3717292 - 3717447 | 6027.24 |
| yrhb family protein | FGC38_RS18380 | Not Available | + | 3717647 - 3717931 | 10613.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism