Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | FGC38_RS16780 | Not Available | - | 3405674 - 3406444 | 27385.6 |
| galactarate/glucarate/glycerate transporter garp | FGC38_RS16785 | Not Available | - | 3406460 - 3407794 | 49012.0 |
| galactarate dehydratase | FGC38_RS16790 | Not Available | + | 3408169 - 3409740 | 56404.9 |
| type ii toxin-antitoxin system antitoxin prlf | FGC38_RS16795 | Not Available | + | 3409889 - 3410224 | 12359.7 |
| type ii toxin-antitoxin system ribonuclease toxin yhav | FGC38_RS16800 | Not Available | + | 3410224 - 3410688 | 17837.2 |
| aga operon transcriptional regulator agar | FGC38_RS16805 | Not Available | - | 3410743 - 3411552 | 29574.3 |
| tagatose-bisphosphate aldolase subunit kbaz | FGC38_RS16810 | Not Available | + | 3411801 - 3413081 | 47195.0 |
| pts n-acetylgalactosamine transporter subunit iib | FGC38_RS16815 | Not Available | + | 3413104 - 3413577 | 17086.9 |
| hypothetical protein | FGC38_RS16820 | Not Available | + | 3413588 - 3413959 | 12685.1 |
| hypothetical protein | FGC38_RS16825 | Not Available | + | 3413955 - 3414512 | 19320.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism