Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannitol transporter subunit iicb | FGC38_RS15860 | Not Available | - | 3210360 - 3211748 | 48974.1 |
| pts mannitol transporter subunit iia | FGC38_RS15865 | Not Available | - | 3211776 - 3212219 | 16047.1 |
| transketolase | FGC38_RS15870 | Not Available | - | 3212533 - 3214524 | 72215.7 |
| metalloprotease loip | FGC38_RS15875 | Not Available | + | 3214802 - 3215560 | 26843.9 |
| agmatinase | FGC38_RS15880 | Not Available | - | 3215766 - 3216686 | 33558.9 |
| biosynthetic arginine decarboxylase | FGC38_RS15885 | Not Available | - | 3216824 - 3218800 | 73902.7 |
| acid stress response protein yqgb | FGC38_RS15890 | Not Available | - | 3218809 - 3218940 | 4859.08 |
| protein yqgg | FGC38_RS23860 | Not Available | - | 3219034 - 3219177 | 5220.17 |
| protein yqgd | FGC38_RS23865 | Not Available | - | 3219288 - 3219539 | 9519.81 |
| methionine adenosyltransferase | FGC38_RS15895 | Not Available | + | 3219595 - 3220749 | 41954.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism